The detailed information of tRNA gene sequence


Sequence ID>w006982
Genome IDAAIC01000226
Search identical group
Phylum/ClassChlorobiota
SpeciesChlorobium phaeobacteroides BS1 [AAIC]
Start position on genome 2577
End posion on genome 2653
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttcatactcc
tRNA gene sequence 
GGGGGATTAGCTCAGTTGGCTAGAGCGCTAGATTTGCATTCTAGAGGTCAAGGGTTCGAC
TCCCTTATTCTCCACAT
Downstream region at tRNA end position 
ttttctaaag
Secondary structure (Cloverleaf model)
>w006982	Ala	TGC
                   c      ACAT ttttctaaag
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T C
                    T     T T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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