The detailed information of tRNA gene sequence


Sequence ID>w006952
Genome IDAAIC01000017
Search identical group
Phylum/ClassChlorobiota
SpeciesChlorobium phaeobacteroides BS1 [AAIC]
Start position on genome 11441
End posion on genome 11349
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccctaaatcT
tRNA gene sequence 
GGAGAGGTCGCATAGTTGGTCTAGTGCGCTCGCCTGGAAAGCGGGTAGGGTCTAACGGCC
CTCGAGGGTTCGAATCCCTCCCTCTCCGCAG
Downstream region at tRNA end position 
Caagaaaagc
Secondary structure (Cloverleaf model)
>w006952	Ser	GGA
                   T      GCAG Caagaaaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G A G G G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TAGGGTCTAACGGCCCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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