The detailed information of tRNA gene sequence


Sequence ID>w006948
Genome IDAAIC01000004
Search identical group
Phylum/ClassChlorobiota
SpeciesChlorobium phaeobacteroides BS1 [AAIC]
Start position on genome 24609
End posion on genome 24686
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
actctttcaa
tRNA gene sequence 
GGAGCTGTAGCTCAGCTTGGTTAGAGCGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGA
GTCCCGTCAGCTCCGCAA
Downstream region at tRNA end position 
aaacataaga
Secondary structure (Cloverleaf model)
>w006948	Asp	GTC
                   a      GCAA aaacataaga
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
    T C G A        A      + | | | |     G
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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