The detailed information of tRNA gene sequence


Sequence ID>W141020298
Genome IDAJIP01000019
Search identical group
Phylum/ClassThermotogota
SpeciesThermosipho africanus H17ap60334 [AJIP]
Start position on genome 197839
End posion on genome 197928
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attgatgcaa
tRNA gene sequence 
GGAGGCGTGCACCGAACTGGCTAAGGGGCCGGTCTCGAAAACCGGTGGGCAGCAATGCCC
TTGTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
aatacaaagg
Secondary structure (Cloverleaf model)
>W141020298	Ser	CGA
                   a      GCCA aatacaaagg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
    C A A G        G      | | | | |     G
  T         C C A C       G T G G G     C
  G           |   |                 T T
  G         A G G G
    C T A          G     TGGGCAGCAATGCCCTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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