The detailed information of tRNA gene sequence


Sequence ID>W141020316
Genome IDAJIP01000043
Search identical group
Phylum/ClassThermotogota
SpeciesThermosipho africanus H17ap60334 [AJIP]
Start position on genome 101215
End posion on genome 101290
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
actattgatg
tRNA gene sequence 
GTGGCTATAGCTCAGCTGGTAGAGCGCCTGACTGTGGATCAGGTGGTCGCGGGTTCAAAT
CCCGCTAGCCACCCCA
Downstream region at tRNA end position 
ttttttattg
Secondary structure (Cloverleaf model)
>W141020316	His	GTG
                   g      CCCA ttttttattg
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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