The detailed information of tRNA gene sequence


Sequence ID>W141020334
Genome IDAJIP01000047
Search identical group
Phylum/ClassThermotogota
SpeciesThermosipho africanus H17ap60334 [AJIP]
Start position on genome 59184
End posion on genome 59109
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ataaaaacgc
tRNA gene sequence 
AGGGGCGTAGCTCAACTGGCAGAGCACCGGTCTCCAAAATCGGGTGTTGCGGGTTCAAGT
CCTGCCGCCCCTGCCA
Downstream region at tRNA end position 
aatttttttt
Secondary structure (Cloverleaf model)
>W141020334	Trp	CCA
                   c      GCCA aatttttttt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C G T C C     A
      C A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GTGTT
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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