The detailed information of tRNA gene sequence


Sequence ID>W141022773
Genome IDAJUN01000064
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesSyntrophorhabdus aromaticivorans UI [AJUN]
Start position on genome 47773
End posion on genome 47868
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
taacacttgt
tRNA gene sequence 
GGAAGTGCCGAGGCGCCTGGTGGGCCTCCTGGTCTTCAAAACCAGTGCACCGGTGACGAG
CTGGTGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
tttatacttg
Secondary structure (Cloverleaf model)
>W141022773	SeC(p)	TCA
                   t      GCCA tttatacttg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    C     T A C C C     A
      C C G        G      + | | | |     G
    T       C G G A       G T G G G     C
    G       | | | |                 T T
    G       G C C T
      T G G        C     TGCACCGGTGACGAGCTGGTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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