The detailed information of tRNA gene sequence


Sequence ID>WENV180247703
Genome IDOBEQ010050918
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 360
End posion on genome 451
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tatccaaagt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGATGGCGACGGTCTTGAAAACCGTTATCCCGCGAATGCGG
GATCGAGGGTTCGAATCCCTCCCTCTCCCCCA
Downstream region at tRNA end position 
cggcgttcgc
Secondary structure (Cloverleaf model)
>WENV180247703	Ser	TGA
                   t      CCCA cggcgttcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G       + | | |                 T T
    T       T G G C
      C G A        G     TATCCCGCGAATGCGGGATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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