The detailed information of tRNA gene sequence


Sequence ID>WENV180252410
Genome IDOBEQ010447840
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 159
End posion on genome 69
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcgcccttc
tRNA gene sequence 
GGAGGGGTGGATGCGCGGTTTTAGTCCCCCCCCTGGAAAGCGTGTTTAGGTTTATAGCCT
AACGGGGGTTCGAATCCCCCCCCCTCCGCCA
Downstream region at tRNA end position 
gcatcaaaaa
Secondary structure (Cloverleaf model)
>WENV180252410	Ser	GGA
                   c      GCCA gcatcaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G C        G      | | | | |     G
    G       G T A G       G G G G G     C
    G         + | |                 T T
    T       A G T C
      T T T        C     TTTAGGTTTATAGCCTAAC
                    C - G
                    C   T
                    C - G
                    C   C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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