The detailed information of tRNA gene sequence


Sequence ID>WENV180255625
Genome IDOBEQ010740420
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 391
End posion on genome 316
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCGCTGGTTCGAG
TCCAGCCAGACCCACCc
Downstream region at tRNA end position 
tatttcacac
Secondary structure (Cloverleaf model)
>WENV180255625	Ile2	CAT
                   n      ACCc tatttcacac
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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