The detailed information of tRNA gene sequence


Sequence ID>WENV180255863
Genome IDOBEQ010762701
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 5313
End posion on genome 5397
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcacatctgt
tRNA gene sequence 
GCGGGGGTCGCCTAGCCTGGTAGGGCGTGGGATTGCTAATCCCATGTCCGTAAGGACCCG
TGGGTTCGAATCCCACTCCCCGCGCtt
Downstream region at tRNA end position 
cttatttttc
Secondary structure (Cloverleaf model)
>WENV180255863	Ser	GCT
                   t      GCtt cttatttttc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C A C C C     A
      C G A        C      | | | | |     G
    C       T C C G       G T G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTCCGTAAGGACCC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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