The detailed information of tRNA gene sequence


Sequence ID>W141024204
Genome IDAKIL01000006
Search identical group
Phylum/ClassMycoplasmatota
SpeciesMilkweed yellows phytoplasma phytoplasma str. MW1 [AKIL]
Start position on genome 3465
End posion on genome 3377
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaaattatc
tRNA gene sequence 
GGAGGGGTACTCAAGTGGTTTAAGAGGCTCGCTTGGAAAGCGCGTAGATCTGAAAAGATG
CGAGGGTTCGAATCCCTTCTCCTCCGCCA
Downstream region at tRNA end position 
aattaataaa
Secondary structure (Cloverleaf model)
>W141024204	Ser	GGA
                   c      GCCA aattaataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     T T C C C     A
      T G A        A      + | | | |     G
    G       A C T C       G A G G G     C
    G         | | |                 T T
    T       A G A G
      T T A        G     TAGATCTGAAAAGATGC
                    C - G
                    T   C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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