The detailed information of tRNA gene sequence


Sequence ID>W141024267
Genome IDAKIN01000019
Search identical group
Phylum/ClassMycoplasmatota
SpeciesVaccinium witches'-broom phytoplasma phytoplasma str. VAC [AKIN]
Start position on genome 1356
End posion on genome 1266
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtttcagat
tRNA gene sequence 
GGAGTAGTACTCAAGTGGTTATAAGAGGCGTCCCTGCTAAGGACGTAGTCCAATTTTTGG
TGCAAGGGTTCGAATCCCTTCTGCTCCGCCA
Downstream region at tRNA end position 
attataaaaa
Secondary structure (Cloverleaf model)
>W141024267	Ser	GCT
                   t      GCCA attataaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     A - T
                     G - C          T A
                    T     T T C C C     A
    G T G A        A      | | | | |     G
  G         A C T C       A A G G G     C
  T           | | |                 T T
  T         A G A G
    A T A          G     TAGTCCAATTTTTGGTGC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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