The detailed information of tRNA gene sequence


Sequence ID>W141024271
Genome IDAKIN01000029
Search identical group
Phylum/ClassMycoplasmatota
SpeciesVaccinium witches'-broom phytoplasma phytoplasma str. VAC [AKIN]
Start position on genome 182
End posion on genome 268
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tggcttattt
tRNA gene sequence 
GCCTGAATGGTGGAACAGGTAGACACGTGGGACTTAAAATCCCATGGTTTTAGAGCCGTG
CCGGTTCAAGTCCGGCTTCAGGTACCA
Downstream region at tRNA end position 
ttaaaaaaaa
Secondary structure (Cloverleaf model)
>W141024271	Leu	TAA
                   t      ACCA ttaaaaaaaa
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C
                     A - T
                     A - T          T G
                    T     C G G C C     A
      C A A        G      | | | | |     A
    A       G G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGGTTTTAGAGCCGT
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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