The detailed information of tRNA gene sequence


Sequence ID>W141024274
Genome IDAKIN01000029
Search identical group
Phylum/ClassMycoplasmatota
SpeciesVaccinium witches'-broom phytoplasma phytoplasma str. VAC [AKIN]
Start position on genome 493
End posion on genome 569
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accatcgtat
tRNA gene sequence 
GGACCTGTAGCTCAGTTGGTCAGAGCCACCGGCTCATAACCGGTTGGTCGTAGGTTCGAA
TCCTACCGGGTCCACCA
Downstream region at tRNA end position 
taaatttaat
Secondary structure (Cloverleaf model)
>W141024274	Met	CAT
                   t      ACCA taaatttaat
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        C     TGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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