The detailed information of tRNA gene sequence


Sequence ID>W141024277
Genome IDAKIN01000085
Search identical group
Phylum/ClassMycoplasmatota
SpeciesVaccinium witches'-broom phytoplasma phytoplasma str. VAC [AKIN]
Start position on genome 29
End posion on genome 105
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagttgagat
tRNA gene sequence 
CGCGGGATAGAGCAGTTTGGTAGCTCGTCGGGCTCATAATCCGAAGGCCGTAGGTTCAAA
TCCTACTCCCGCAACCA
Downstream region at tRNA end position 
aaaaaaacac
Secondary structure (Cloverleaf model)
>W141024277	Met	CAT
                   t      ACCA aaaaaaacac
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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