The detailed information of tRNA gene sequence


Sequence ID>W141024278
Genome IDAKIN01000085
Search identical group
Phylum/ClassMycoplasmatota
SpeciesVaccinium witches'-broom phytoplasma phytoplasma str. VAC [AKIN]
Start position on genome 121
End posion on genome 196
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aacacaaaaa
tRNA gene sequence 
GGTCCGGTGGTGTAGTGGTTAACATGCTTGCCTGTCACGCAGGAGATCGCGGGTTCAATC
CCCGTCCGGACCGCCA
Downstream region at tRNA end position 
agtaaatagt
Secondary structure (Cloverleaf model)
>W141024278	Asp	GTC
                   a      GCCA agtaaatagt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          C T
                    T     T G C C C     A
      T G A        G      + | | | |     A
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGATC
                    C - G
                    T + G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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