The detailed information of tRNA gene sequence


Sequence ID>W141024279
Genome IDAKIN01000085
Search identical group
Phylum/ClassMycoplasmatota
SpeciesVaccinium witches'-broom phytoplasma phytoplasma str. VAC [AKIN]
Start position on genome 218
End posion on genome 293
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aacaatattt
tRNA gene sequence 
GGCTCTGTAGCTCAGTCGGTAGAGCAGTGGCTTGAAGAGCCTCGTGTCGGCAGTTCGATT
CTGCCCGGAGCCACCA
Downstream region at tRNA end position 
tttattatat
Secondary structure (Cloverleaf model)
>W141024279	Phe	GAA
                   t      ACCA tttattatat
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C          T T
                    T     C C G T C     A
      T G A        A      | | | | |     G
    C       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    T   T
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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