The detailed information of tRNA gene sequence


Sequence ID>WENV180266013
Genome IDOBEQ011711293
Search identical group
Phylum/Class[OBEQ] groundwater metagenome; groundwater
Species
Start position on genome 318
End posion on genome 228
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnncc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGCGCACCCCTGCTAAGGGTGTAAGGGTCAAAAGCCC
TTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
attcgactca
Secondary structure (Cloverleaf model)
>WENV180266013	Ser	GCT
                   c      GCCA attcgactca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAAGGGTCAAAAGCCCTTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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