The detailed information of tRNA gene sequence


Sequence ID>WENV180275505
Genome IDOBHT01051135
Search identical group
Phylum/Class[OBHT] metagenome; hydrothermal vent
Species
Start position on genome 178
End posion on genome 102
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gattgagaga
tRNA gene sequence 
AGCGGGGTAGGGTAGCCAGGTCTATCCCGCCGGGCTCATAACCCGGAGATCGGAGGTTCA
AATCCTCCCCCCGCTACta
Downstream region at tRNA end position 
gttattaatt
Secondary structure (Cloverleaf model)
>WENV180275505	fMet	CAT
                   a      ACta gttattaatt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
    C C G A        A      | | | | |     A
  A         T G G G       G G A G G     C
  G           | | |                 T T
  G         T C C C
    T C T A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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