The detailed information of tRNA gene sequence


Sequence ID>WENV180284582
Genome IDOBID01064454
Search identical group
Phylum/Class[OBID] metagenome; sludge
Species
Start position on genome 662
End posion on genome 586
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tatagattac
tRNA gene sequence 
CGCGCGATGGAGCAGCTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCAAA
TCCTCCTCGCGCAACCA
Downstream region at tRNA end position 
aaaaatagcg
Secondary structure (Cloverleaf model)
>WENV180284582	fMet	CAT
                   c      ACCA aaaaatagcg
                     C   A
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C C T C C     A
      C G A        G      | | | | |     A
    T       C G A G       G G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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