The detailed information of tRNA gene sequence


Sequence ID>WENV180287488
Genome IDOBIK01082585
Search identical group
Phylum/Class[OBIK] hydrothermal vent metagenome; sea water
Species
Start position on genome 220
End posion on genome 134
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atatgataga
tRNA gene sequence 
GCGGAGGTGGTCGAGCCTGGACTATGGCGCCGGACTTGAAATCCGGTGGGGCTTTGCCCC
GCAAGGGTTCAAATCCCTTCCTCCGCGttt
Downstream region at tRNA end position 
ttttatgtaa
Secondary structure (Cloverleaf model)
>WENV180287488	Ser	TGA
                   a      Gttt ttttatgtaa
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
    C C G A        G      | | | | |     A
  T         G C T G       A A G G G     C
  G         + | + |                 T T
  G         T G G C
    A C T A        G     TGGGGCTTTGCCCCGC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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