The detailed information of tRNA gene sequence


Sequence ID>WENV180296616
Genome IDOBJA01001243
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 14478
End posion on genome 14575
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaaggacagc
tRNA gene sequence 
GGAAGTGGATAGGGCACTGGTGGCTCTCCCGGACTTCAAATCCGGTGTAGCGGGTTAATA
GCCCGTTAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
taagttccaa
Secondary structure (Cloverleaf model)
>WENV180296616	SeC	TCA
                   c      GCCA taagttccaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        T      + | | | |     G
    T       G G G A       G T G G G     C
    G       | + | |                 T T
    G       C T C T
      T G G        C     TGTAGCGGGTTAATAGCCCGTTAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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