The detailed information of tRNA gene sequence


Sequence ID>WENV180315042
Genome IDOBKH01007787
Search identical group
Phylum/Class[OBKH] soil metagenome; rice field; elevated CO2 plus elevated temperature
Species
Start position on genome 392
End posion on genome 489
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taagctatac
tRNA gene sequence 
GGAAGTGCGAGGTTCACTGGTGGGGCCCCCGGACTTCAAATCCGGTGTGCCGTCTGCTGA
AGGCGGTAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
aggggttgag
Secondary structure (Cloverleaf model)
>WENV180315042	SeC	TCA
                   c      GCCA aggggttgag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    G     T A C C C     A
      C A C        A      + | | | |     G
    T       T T G G       G T G G G     C
    G       + + | |                 T T
    G       G G C C
      T G G        C     TGTGCCGTCTGCTGAAGGCGGTAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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