The detailed information of tRNA gene sequence


Sequence ID>WENV180315462
Genome IDOBKH01100399
Search identical group
Phylum/Class[OBKH] soil metagenome; rice field; elevated CO2 plus elevated temperature
Species
Start position on genome 335
End posion on genome 247
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgcccgctgg
tRNA gene sequence 
GGAGAGCTGGCCGAGCTGGTCGAAGGCGCCTGACTCGAAATCAGGTGTACCGGTAACGGT
ACCGGGGGTTCGAATCCCTCGCTCTCCGCtt
Downstream region at tRNA end position 
ctttgttatg
Secondary structure (Cloverleaf model)
>WENV180315462	Ser	CGA
                   g      GCtt ctttgttatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     C T C C C     A
    T C G A        G      | + | | |     G
  G         G C C G       G G G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TGTACCGGTAACGGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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