The detailed information of tRNA gene sequence


Sequence ID>WENV180317332
Genome IDOBKJ01117345
Search identical group
Phylum/Class[OBKJ] metagenome; hydrothermal vent
Species
Start position on genome 162
End posion on genome 71
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatgacccag
tRNA gene sequence 
GGAGAGGTGACCGAGATGGCTGAAGGTGCACGCCTGGAAAGCGTGTGTATCCTAACCGGG
TACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ccgatcatgc
Secondary structure (Cloverleaf model)
>WENV180317332	Ser	GGA
                   g      GCCA ccgatcatgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T A G A        G      | | | | |     G
  G         G C C A       G A G G G     C
  G           | | |                 T T
  C         A G G T
    T G A          G     TGTATCCTAACCGGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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