The detailed information of tRNA gene sequence


Sequence ID>WENV180352339
Genome IDOBLQ010227372
Search identical group
Phylum/Class[OBLQ] soil metagenome; soil
Species
Start position on genome 507
End posion on genome 410
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcgccggcgc
tRNA gene sequence 
GGAAGCGCATCGGGGCTGGTGTCCTGCGCGGACTTCAAATCCGTTGGGAGCCGGGGGAAC
CCGGCTCCGGTGGGTTCGATTCCCACACGCTTCCGCCA
Downstream region at tRNA end position 
cccgtgtctc
Secondary structure (Cloverleaf model)
>WENV180352339	SeC	TCA
                   c      GCCA cccgtgtctc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     C   A          T T
                    A     C A C C C     A
      T C G        T      | | | | |     G
    G       G G G C       G T G G G     C
    G       | | + |                 T T
    T       C C T G
      G T          C     TGGGAGCCGGGGGAACCCGGCTCCG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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