The detailed information of tRNA gene sequence


Sequence ID>w002242
Genome IDAAAX02000001
Search identical group
Phylum/ClassCyanobacteriota
SpeciesProchlorococcus marinus subsp. pastoris str. CCMP1378 [AAAX]
Start position on genome 368424
End posion on genome 368350
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ctttttttca
tRNA gene sequence 
GCCCTTGTAGCTCAGCGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCTCGGGTTCAAGTC
CCGACGAGGGCATAC
Downstream region at tRNA end position 
ctcgaaacct
Secondary structure (Cloverleaf model)
>w002242	Thr	GGT
                   a      ATAC ctcgaaacct
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T + G
                     G - C          T G
                    T     A G C C C     A
        G A        A      | | | | |     A
      C     C T C G       T C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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