The detailed information of tRNA gene sequence


Sequence ID>w002237
Genome IDAAAX02000001
Search identical group
Phylum/ClassCyanobacteriota
SpeciesProchlorococcus marinus subsp. pastoris str. CCMP1378 [AAAX]
Start position on genome 776478
End posion on genome 776400
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgtatgtaT
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGAAGTTCAAA
TCTTCTCCCCGCCACCA
Downstream region at tRNA end position 
Atgagaagcc
Secondary structure (Cloverleaf model)
>w002237	Met	CAT
                   T      ACCA Atgagaagcc
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T T C     A
      T G A        A      + | | | |     A
    C       C G A G       G G A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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