The detailed information of tRNA gene sequence


Sequence ID>w002236
Genome IDAAAX02000001
Search identical group
Phylum/ClassCyanobacteriota
SpeciesProchlorococcus marinus subsp. pastoris str. CCMP1378 [AAAX]
Start position on genome 819818
End posion on genome 819742
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tataattcac
tRNA gene sequence 
GTCAATGTAGCTCAGTTGGTTAGAGCACGACATTCATATCGTCGCGGTCGGCGGTTCAAA
TCCGCCCATTGACATTT
Downstream region at tRNA end position 
taatgaactt
Secondary structure (Cloverleaf model)
>w002236	Met	CAT
                   c      ATTT taatgaactt
                     G - C
                     T - A
                     C - G
                     A - T
                     A - T
                     T - A
                     G - C          T A
                    T     C C G C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    C - G
                    G - C
                    A - T
                    C - G
                    A   C
                  T       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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