The detailed information of tRNA gene sequence


Sequence ID>W141038139
Genome IDALVI01000004
Search identical group
Phylum/ClassCyanobacteriota
SpeciesKamptonema formosum PCC 6407 [ALVI]
Start position on genome 41970
End posion on genome 41899
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
ttccgccatc
tRNA gene sequence 
GCAACCTTGGCCGATCGGAGAGGCAACGAACTCATAATTCGTCTGAGCTGGGTTCAACTC
CCAGAGGTTGCAtaa
Downstream region at tRNA end position 
taaatatggg
Secondary structure (Cloverleaf model)
>W141038139	Pseudo	CAT
                   c      Ataa taaatatggg
                     G - C
                     C - G
                     A - T
                     A - T
                     C - G
                     C - G
                     T - A          T C
                    T     G A C C C     A
        T A        G      | | | | |     A
      C     G C C G       C T G G G     C
      G       | | |                 T T
      G     A G G C
        A G        A     CTGAG
                    A - T
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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