The detailed information of tRNA gene sequence


Sequence ID>W141038179
Genome IDALVI01000055
Search identical group
Phylum/ClassCyanobacteriota
SpeciesKamptonema formosum PCC 6407 [ALVI]
Start position on genome 15587
End posion on genome 15502
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgtccaaaa
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCTGATGGCATCTGTTTGCTAAACAGAATCGGGTTATTCCGAC
GCAGGTTCAAATCCTGTTCTCTCCGCtt
Downstream region at tRNA end position 
ttcccccggt
Secondary structure (Cloverleaf model)
>W141038179	Ser	GCT
                   a      GCtt ttcccccggt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T G T C C     A
      A G A        G      + | | | |     A
    G       G C C G       G C A G G     C
    G       + | | |                 T T
    C       T G G C
      T G A        A     ATCGGGTTATTCCGAC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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