The detailed information of tRNA gene sequence


Sequence ID>W141038312
Genome IDALVO01000004
Search identical group
Phylum/ClassCyanobacteriota
SpeciesGeminocystis herdmanii PCC 6308 [ALVO]
Start position on genome 626284
End posion on genome 626370
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atctgtgtta
tRNA gene sequence 
GGAGAGATGGCAGAGCGGTTGAATGCGGTAGTCTCGAAAACTATTAAGGTGTAAAAACCT
TCGAGGGTTCAAATCCCTCTCTCTCCGttg
Downstream region at tRNA end position 
tttttatctt
Secondary structure (Cloverleaf model)
>W141038312	Ser	CGA
                   a      Gttg tttttatctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TAAGGTGTAAAAACCTTC
                    G + T
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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