The detailed information of tRNA gene sequence


Sequence ID>W141038319
Genome IDALVO01000004
Search identical group
Phylum/ClassCyanobacteriota
SpeciesGeminocystis herdmanii PCC 6308 [ALVO]
Start position on genome 281290
End posion on genome 281217
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaagcaaaa
tRNA gene sequence 
GGCTTGGTAGCTCAGTTGGTTAGAGCAGGGGACTCATAAGCCCAAGGTCGGCGGTTCAAA
TCCGCCCCGAGCCAttt
Downstream region at tRNA end position 
ttaatgtata
Secondary structure (Cloverleaf model)
>W141038319	Met	CAT
                   a      Attt ttaatgtata
                     G - C
                     G - C
                     C - G
                     T - A
                     T + G
                     G - C
                     G - C          T A
                    T     C C G C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G   A
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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