The detailed information of tRNA gene sequence


Sequence ID>W141038734
Genome IDALWC01000008
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechococcus sp. PCC 7336 [ALWC]
Start position on genome 440297
End posion on genome 440209
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gttcctgtcg
tRNA gene sequence 
GGAGAGATGGCAGAGTCCGGTCGATTGCGGCTGACTTGAAATCAGCAGACCTCGTAAGAG
GTCCGGGGGTTCGAATCCCTCTCTCTCCGttt
Downstream region at tRNA end position 
cccgctccac
Secondary structure (Cloverleaf model)
>W141038734	Ser	TGA
                   g      Gttt cccgctccac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  C         G A C G       G G G G G     C
  G         + | | |                 T T
  G         T T G C
    T C G A        G     AGACCTCGTAAGAGGTCC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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