The detailed information of tRNA gene sequence


Sequence ID>W141038778
Genome IDALWD01000156
Search identical group
Phylum/ClassCyanobacteriota
Species[Scytonema hofmanni] UTEX B 1581 UTEX 2349 [ALWD]
Start position on genome 10780
End posion on genome 10706
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
actcccaaat
tRNA gene sequence 
GGCTGAGTAGCTAAGTGGTTGAAGGCGTCGCTCTGCAAAAGCGAATATCGTGAGTTCAAA
TCTCACCTCAGCCTCtg
Downstream region at tRNA end position 
gtgtcgcagt
Secondary structure (Cloverleaf model)
>W141038778	Cys	GCA
                   t      TCtg gtgtcgcagt
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C          T A
                    T     C A C T C     A
      T G A        A      | | | | |     A
    G       A T C G       G T G A G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     ATATC
                    T - A
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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