The detailed information of tRNA gene sequence


Sequence ID>W141038782
Genome IDALWD01000156
Search identical group
Phylum/ClassCyanobacteriota
Species[Scytonema hofmanni] UTEX B 1581 UTEX 2349 [ALWD]
Start position on genome 10381
End posion on genome 10289
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gacccactgt
tRNA gene sequence 
GGAGAAGTGGCTGAGTGGCTAAAAGCGTCTTCCTGCTAAGAAGAAACGGGTGTTTAATAC
CCGTCGCAGGTTCAAATCCTGTCTTCTGCTACA
Downstream region at tRNA end position 
caaaacttgg
Secondary structure (Cloverleaf model)
>W141038782	Ser	GCT
                   t      TACA caaaacttgg
                     G - C
                     G   G
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     A
    G       G T C G       G C A G G     C
    G         | | |                 T T
    C       A A G C
      T A A        G     AACGGGTGTTTAATACCCGTC
                    T - A
                    C - G
                    T - A
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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