The detailed information of tRNA gene sequence


Sequence ID>w001875
Genome IDAAAP01003875
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesParamagnetospirillum magnetotacticum [AAAP]
Start position on genome 2518
End posion on genome 2440
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acgcggccaT
tRNA gene sequence 
CGGGGTGTAGCTCAGCCTGGTAGAGCGCCAGCTTTGGGAGCTGGATGTCGTAGGTTCGAA
TCCTATCGCCCCGACCA
Downstream region at tRNA end position 
Cttcctgcat
Secondary structure (Cloverleaf model)
>w001875	Pro	TGG
                   T      ACCA Cttcctgcat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T A T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G T A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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