The detailed information of tRNA gene sequence


Sequence ID>w001860
Genome IDAAAP01003827
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesParamagnetospirillum magnetotacticum [AAAP]
Start position on genome 28529
End posion on genome 28607
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ccaccacggT
tRNA gene sequence 
CGGAGCGTAGCGCAGCCCGGTAGCGCATCAGTCTGGGGGACTGGGGGTCGCAGGTTCGAA
TCCTGTCGCTCCGACCA
Downstream region at tRNA end position 
Aagttcggcg
Secondary structure (Cloverleaf model)
>w001860	Pro	GGG
                   T      ACCA Aagttcggcg
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G C A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T + G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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