The detailed information of tRNA gene sequence


Sequence ID>w001840
Genome IDAAAP01003712
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesParamagnetospirillum magnetotacticum [AAAP]
Start position on genome 2255
End posion on genome 2177
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gcttggcgtC
tRNA gene sequence 
GGCCCCGTAGCTCAGCTGGATAGAGCAGCCGCCTTCTAAGCGGCAGGTCGTAGGTTCGAG
CCCTACCGGGGTCGCCA
Downstream region at tRNA end position 
Gctcaaccca
Secondary structure (Cloverleaf model)
>w001840	Arg	TCT
                   C      GCCA Gctcaaccca
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          C G
                    T     C A T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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