The detailed information of tRNA gene sequence


Sequence ID>w001415
Genome IDAAAH02000031
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexus aurantiacus J-10-fl [AAAH]
Start position on genome 48622
End posion on genome 48549
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gccagaacga
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCGCATCGTTCACACCGATGAGGTCACTGGTTCGAG
TCCAGTATCGCCCAcca
Downstream region at tRNA end position 
ctccttttgc
Secondary structure (Cloverleaf model)
>w001415	Val	CAC
                   a      Acca ctccttttgc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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