The detailed information of tRNA gene sequence


Sequence ID>w001404
Genome IDAAAH02000014
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexus aurantiacus J-10-fl [AAAH]
Start position on genome 41318
End posion on genome 41411
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccagccaagc
tRNA gene sequence 
GGGGGCGTGGCAGAGTCCGGTTTAATGCGTCGGTCTTGAAAACCGAAGGACGTAGCAATG
CGTCCCGTGGGTTCGAATCCCACCGCCCCCTCCA
Downstream region at tRNA end position 
gaacagttat
Secondary structure (Cloverleaf model)
>w001404	Ser	TGA
                   c      TCCA gaacagttat
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G A C G       G T G G G     C
  G           | | |                 T T
  G         A T G C
    T T T A        G     AGGACGTAGCAATGCGTCCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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