The detailed information of tRNA gene sequence


Sequence ID>W141042369
Genome IDAMEK01000018
Search identical group
Phylum/ClassBacteroidota
SpeciesAlloprevotella sp. oral taxon 473 oral taxon 473 str. F0040 [AMEK]
Start position on genome 21327
End posion on genome 21239
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaccaggatt
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTAAACGTCAAAAGCGT
TTCGGGGGTTCGAATCCCCCTCTCTCCGCgt
Downstream region at tRNA end position 
gaagtactct
Secondary structure (Cloverleaf model)
>W141042369	Ser	GGA
                   t      GCgt gaagtactct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G G G G G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TAAACGTCAAAAGCGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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