The detailed information of tRNA gene sequence


Sequence ID>w001378
Genome IDAAAH02000002
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexus aurantiacus J-10-fl [AAAH]
Start position on genome 126623
End posion on genome 126536
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcaccgaaaa
tRNA gene sequence 
GGGCAGGTCGCATAGTTGGTCTAGTGCGCGGCACTGGAAATGCCGTACAGCGGCAACGCT
GTCGTGGGTTCGAATCCCACCCTGCCCGcca
Downstream region at tRNA end position 
tatcttatga
Secondary structure (Cloverleaf model)
>w001378	Ser	GGA
                   a      Gcca tatcttatga
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G T G G G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TACAGCGGCAACGCTGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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