The detailed information of tRNA gene sequence


Sequence ID>w001161
Genome IDAAMD01000081
Search identical group
Phylum/ClassMyxococcota
SpeciesStigmatella aurantiaca DW4/3-1 [AAMD]
Start position on genome 1405
End posion on genome 1307
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccgacgttat
tRNA gene sequence 
GGTAGGGCCTCCGGATCTGGTGGCCGGCCCGGTCTTCAAAACCGGTGAGGGGCCGTGAGA
GCGGTCCCTGGTGAGTTCGATTCTCATGCCCTACCGACA
Downstream region at tRNA end position 
tgttttcatc
Secondary structure (Cloverleaf model)
>w001161	SeC	TCA
                   t      GACA tgttttcatc
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T T
                    C     T A C T C     A
      C T A        T      + | | | |     G
    T       G G C C       G T G A G     C
    G       | | | |                 T T
    G       C C G G
      T G G        C     TGAGGGGCCGTGAGAGCGGTCCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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