The detailed information of tRNA gene sequence


Sequence ID>w001116
Genome IDABCS01000070
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 15253
End posion on genome 15176
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ctcccactcG
tRNA gene sequence 
AGCGGGGTAGCACAACGGACGATGCGCCGCCTCTGCAAGGCGGAGGAAGCCGGTTCGACT
CCGGTCCCCGCTCTTC
Downstream region at tRNA end position 
Gtcctgatca
Secondary structure (Cloverleaf model)
>w001116	Ala	TGC
                   G      CTTC Gtcctgatca
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T C
                    T     T G G C C     A
      C A A        A      + | | | |     G
    G       C A C G       G C C G G     C
    G         | | |                 T T
    A       A T G C
      C G          G     AGGAA
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  C       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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