The detailed information of tRNA gene sequence


Sequence ID>w001115
Genome IDABCS01000024
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 17459
End posion on genome 17535
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gggccaacta
tRNA gene sequence 
CCCGGAGAAGCTGAAAGGGTTCAAGCGCTCGGCTGAAGACCGAGAGAAGATAGGTTCGAC
TCCTTCCTCCGGGATCC
Downstream region at tRNA end position 
gatgtagata
Secondary structure (Cloverleaf model)
>w001115	Phe	GAA
                   a      ATCC gatgtagata
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T C
                    A     C T T C C     A
      A A A        A          | | |     G
    G       G T C G       A T A G G     C
    G         | | |                 T T
    G       A A G C
      T T C        G     AGAAG
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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