The detailed information of tRNA gene sequence


Sequence ID>w001114
Genome IDABCS01000024
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 17056
End posion on genome 17129
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ggcgcgtcgc
tRNA gene sequence 
GGGTCCTTAGCTCAGGGGTAGAGCGTCGCTCCGACACGGCGAAGGCCCTGGTTCGATTCC
AGGAGGACCCACTC
Downstream region at tRNA end position 
gacatcactc
Secondary structure (Cloverleaf model)
>w001114	Val	GAC
                   c      ACTC gacatcactc
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A          T T
                    T     G G A C C     A
        G A        A      | | | | |     G
      G     C T C G       C C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGC
                    T - A
                    C - G
                    G - C
                    C - G
                    T + G
                  C       C
                  C       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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