The detailed information of tRNA gene sequence


Sequence ID>w001112
Genome IDABCS01000001
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 283197
End posion on genome 283121
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
caaccaagcT
tRNA gene sequence 
CGGGATGTAGCGCAGTGGAAGCGCGCCTGCACGGGACGCAGGAGGTCGCTGGTTCGATTC
CAGTCATCCCGACTC
Downstream region at tRNA end position 
Tccatgggac
Secondary structure (Cloverleaf model)
>w001112	Pro	GGG
                   T      ACTC Tccatgggac
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T G A C C     A
        G A        A      + | | | |     G
      T     C G C G       G C T G G     C
      G     | | | |                 T T
      G     G C G C
        A A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       C
                  C       A
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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