The detailed information of tRNA gene sequence


Sequence ID>w001101
Genome IDABCK01000020
Search identical group
Phylum/ClassLentisphaerota
SpeciesLentisphaera araneosa HTCC2155 [ABCK]
Start position on genome 86833
End posion on genome 86909
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tattatatac
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGCTAGAGCGCCGCCCTTGCAAGGCGGAGGTCATGGATTCGAA
TTCCATAGGCTCCACTT
Downstream region at tRNA end position 
atgatacgcg
Secondary structure (Cloverleaf model)
>w001101	Ala	TGC
                   c      ACTT atgatacgcg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     T A C C T     A
      C G A        A      | | | | |     G
    T       C T C G       A T G G A     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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